Minerva Gen*NY*Sis Center for Excellence in Cancer Genomics
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SledgeHMMER

This web server is designed to carry out batch searching of the current Pfam database (version 20.0) using the 'hmmpfam' program. The 'hmmpfam' program used in this web server is optimized to run several times faster than the original program from the 2.3.2 release of HMMER.
Upload a protein sequence file (in FASTA format)
(maximum number of sequences per submission is currently 200) OR

Enter protein sequence(s) in FASTA format   Example
(maximum number of sequences per submission is currently 200)    

Type of Search 

Type of Cutoff    Gathering threshold (GA)    E-value

Email address to receive results (Required)

   

Last updated on 09/07/2006.
 

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