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CEMC - Multiple Protein Structure Alignment Server
Master-slave alignment with CE algorithm.
10 20 30 40 50
1CDKA ( 27 ) lkkwenpaqntahld--q--Feriktlgtgsf---g----rvmlVkhket
1A6O ( 23 ) ywdyealtvqwgeqd--d--yevvrkvgrgky---s----evfeGinvnn
1HCK ( 1 ) me--n--Fqkvekigegty---G----vvykArnklt
1BLXA ( 12 ) q--yecvae--igegayGk----vfkArDl-kn
1JNK ( 110 )
3ERK ( 26 ) lsyigegay---g----mvcsaydnln
1BMKA ( 19 ) ev--perYqnlspvgsgay---G----svcaAfDtkt
1KOBA ( 43 ) evkqgsvydyY--dIleelgsg-af---g----vvhrCvekat
1TKIA ( 20 ) Lye--k--Ymiaedlg-------rgefgivhrCvetss
1PHK ( 15 ) Fye--n--Yepkeilgrgvs---s----vvrrCihkpt
1A06 ( 16 ) Ird--i--Ydfrdvlgtgaf---s----evilAedkrt
bbbbbbbbb bbbbbbb
60 70 80 90 100
1CDKA ( 66 ) gnhfaMkiLd---kqk-----------VvklkqiehtlnE--------kr
1A6O ( 62 ) nekCiIkiLk---pv-----------------kkkkikrE--------Ik
1HCK ( 27 ) gevVaLkkir--- te---------gvpstAireIs
1BLXA ( 36 ) ggrfValkrVrVqtge-----------egmplstireVav--------Lr
1JNK ( 110 ) re--------lv
3ERK ( 46 ) kvrVaikkIs---Pfe-----------hq--tycqrtlre--------ik
1BMKA ( 47 ) ghrVaVkkls---rP------------fqsiihakrtyre--------lr
1KOBA ( 76 ) grvFvAkfin---Tpy-----------pl---dkytvkne--------Is
1TKIA ( 47 ) kktymAkfV-----kv-----------kgtdQvlv--kke--------is
1PHK ( 42 ) ckeyaVkiId---Vtgggsfsaeevqel-----reaTlkE--------Vd
1A06 ( 43 ) qklVaIkcia---k ene--------ia
bbbbbbb aa aaa aa
110 120 130 140 150
1CDKA ( 94 ) ILqaVn--fpfLVkLeysF--------kd-------------n-----sn
1A6O ( 84 ) ILqnLc-ggpnIVkLldiV--------rd-----------qhs-----kt
1HCK ( 54 ) llkeln--hpnIVkLldvi--------ht-------------e-----nk
1BLXA ( 67 ) hLetfe--hpNVVrLfdvc--------tv-------------srtdretk
1JNK ( 114 ) lMkcvn--hkNIIsLlnvftpqktleefq---------------------
3ERK ( 72 ) iLlrFr--heNIIgIndii--------ra------ptieq--m-----kd
1BMKA ( 74 ) llkhMk--henViglldvf--------tparslee-------f-----nd
1KOBA ( 101 ) IMnqLh--hpkLinLhdAF--------ed-------------k-----ye
1TKIA ( 71 ) iLniAr--hrNIlhLhesf--------es-------------m-----ee
1PHK ( 76 ) ILrkVsg-hpnIIqLkdty--------et-------------n-----tf
1A06 ( 69 ) vlhkIk--hpnIvaLddiy--------es-------------g-----gh
aaaa bbbbb b
160 170 180 190 200
1CDKA ( 116 ) lYMVmeyVpggeMfshLrr-i-g----rFsephArfyAaQIVlTFeyLhs
1A6O ( 109 ) pSLIfeyVnntdfkvLy-----p----tLtdydIryYIyeLLkALdyChs
1HCK ( 76 ) LyLVfefL-hqdLkkfmda-s-a--ltgIplplIksYLfqLLqGLafChs
1BLXA ( 94 ) LtLVfehvd-qdLttyLdk-v-pep--gVptetIkdMMfqLLrGLdfLhs
1JNK ( 141 ) dvylvmelMdanLcqviq----m----eLdHerMSyLLyQMLcGIkhLHs
3ERK ( 99 ) vyivqdlM-etdLyklLkt-q-h-----LsndhIcyFLyQILrGLkyIHs
1BMKA ( 102 ) VyLVthlm-gadLnniVk--c-q----kltddhVQfLIyQILrGLkyIhs
1KOBA ( 123 ) MVLIlefLsGgeLfdriaa-edy----kmseaeVInYMrqACeGLkhMHe
1TKIA ( 93 ) LvMIfefIsGldIferintsa-f----elnereIvsYVhqVCeALqfLhs
1PHK ( 99 ) FFLVfdlMkkgeLfdylte-k-v----tLsekeTrkiMraLLeVIcaLhk
1A06 ( 91 ) lyLImqlvsGgeLfdrive-k-g----fyterdAsrlIfQVLdAVkyLHd
bbbbb aaaaa aaaaaaaaaaaaaaaaaaaa
210 220 230 240 250
1CDKA ( 160 ) ldLIYRdLkPenLlid-q-------qgyIqVtd----------------F
1A6O ( 150 ) qgIMHRdVkPhNVmIdhe-------lrkLrLid----------------W
1HCK ( 121 ) hrvlHrdLkPqnLlIn-t-------egaIkLad----------------F
1BLXA ( 139 ) hrvvHrdLkPqNIlVt-s-------sgqIkLadfglariysfqmaltsvv
1JNK ( 183 ) agiiHrdLkPsnIvvk-s-------dctLkIld----------------F
3ERK ( 141 ) anvLHRdLkPsnLlLn-t-------tcdLkIcd----------------F
1BMKA ( 144 ) adiiHrdLkPsNLAVn-e-------dceLkIld----------------F
1KOBA ( 168 ) hsIvHLdIkpeNImCe-t-----kkassVkIid----------------F
1TKIA ( 138 ) hnIGHFDIrPenIiYq-t---rr--sstIKIie----------------F
1PHK ( 143 ) lnIVHrdLkPenIlLd-d-------dmnIkLtd----------------F
1A06 ( 135 ) lgivHrdLkPenLlYy-slde----dskIMIsd----------------f
333bbb bbb
260 270 280 290 300
1CDKA ( 186 ) gfAkrvk----grTw------tlcg------------------------t
1A6O ( 177 ) glAEFyh--pgkeYn------vrVA------------------------s
1HCK ( 147 ) GLArAfg----vpvr------tyth---------------------evvt
1BLXA ( 181 ) ---------------------------------------------v---t
1JNK ( 209 ) Gla sfmmtpyvv----t
3ERK ( 167 ) GlArvAd----pdhdhtgflteyva------------------------t
1BMKA ( 170 ) gla-------------------rht--ddemtgyva-------------t
1KOBA ( 196 ) glAtkln----pdei------vkvtta----------------------t
1TKIA ( 166 ) gqArqlk----pgdn------frLl------------------------f
1PHK ( 169 ) gfScqLdpg--eklr------evcg------------------------t
1A06 ( 182 )
310 320 330 340 350
1CDKA ( 202 ) ----peyLAPEIils-------k-GY-nk-AVDWWaLGVLIYEMAAGypP
1A6O ( 195 ) ----ryFkGPELLVd-------l-qd-YdysLDMWSLGCMFAgMIFrkep
1HCK ( 166 ) ----lwyrAPEiLLg-------ckyy-st-aVDIWsLGCIFAeMVtrral
1BLXA ( 183 ) ----lwyrAPEvLLq-------s-sy-at-pVDLWSVGCIFAeMfrrkpL
1JNK ( 227 ) ----ryyrAPEvIlg-------m-gy-ke-NVDIWSVGCIMGeMVrhkiL
3ERK ( 189 ) ----rwyrAPeIMLn-------S-kGytk-sIDIWsVGCILAeMLsnrpi
1BMKA ( 186 ) ----RwYrAPEiMln------Wm-hy-nq-tVDIWSVGCIMAeLltGrtl
1KOBA ( 214 ) ----AeFaAPEivdr-------e-pv-gf-yTDMWaIGVLGYvLLsglsP
1TKIA ( 182 ) --tapeyYAPEvHqh-------d-vv-st-aTDMWSLGTLVYvLLSginP
1PHK ( 187 ) ----pSylAPEIIeCsmndnh-p-GY-Gk-eVDMWsTGVIMYtLLAGspP
1A06 ( 182 ) pgyvAPevlaq-------k-py-sk-aVDCWSIGVIAYILLcgypP
aaaa aaaaaaaaaaaaaaa
360 370 380 390 400
1CDKA ( 238 ) FfadqpiqIyekIvsgk-------------------------------v-
1A6O ( 232 ) FFyGhdnhdQLvkIAkv-------------------------------L-
1HCK ( 203 ) FpGdseidQLfrI-Frt-------------------------------L-
1BLXA ( 219 ) FrGssdvdQLgkILdvi-------------------------------g-
1JNK ( 263 ) FpgrdyidQWnkVIeqlGtpcpeFmkkLqptvrnyVenrpkyaGltfpk-
3ERK ( 226 ) FpG-khyldQLnhIlgi-------------------------------LG
1BMKA ( 223 ) FpGt---dhidQLklIL-------------------------------r-
1KOBA ( 250 ) FageddleTlqnVkrCd-------------------------------w-
1TKIA ( 220 ) FlaetnqqiienImnae-------------------------------y-
1PHK ( 229 ) FwhrkqmlmlrmImsgn-------------------------------y-
1A06 ( 218 ) FydendaklfeqIlkae-------------------------------y-
aaaaaaaaaa
410 420 430 440 450
1CDKA ( 256 ) --------------------------------------------------
1A6O ( 250 ) --------------------------------------------------
1HCK ( 220 ) --------------------------------------------------
1BLXA ( 237 ) -------------------------------lpgeedwprdvalprqafh
1JNK ( 312 ) --------------------------------------------------
3ERK ( 244 ) spsqedlncIinlkArnyLlslphknkvpwn-------------------
1BMKA ( 238 ) --------------------------------------------------
1KOBA ( 268 ) --------------------------------------------------
1TKIA ( 238 ) --------------------------------------------------
1PHK ( 247 ) --------------------------------------------------
1A06 ( 236 ) --------------------------------------------------
460 470 480 490 500
1CDKA ( 256 ) --------------------------------------------------
1A6O ( 250 ) --------------------------------------gTdgLnvYlnky
1HCK ( 220 ) --------gtPdevvWpgVtsmpdykpsFpkwarqdfs------------
1BLXA ( 256 ) sksaqpIe------------------------------------------
1JNK ( 312 ) --------------------------------------------------
3ERK ( 275 ) --------------------------------------------------
1BMKA ( 238 ) --------------------------------------------------
1KOBA ( 268 ) --------------------------------------------------
1TKIA ( 238 ) --------------------------------------------------
1PHK ( 247 ) --------------------------------------------------
1A06 ( 236 ) --------------------------------------------------
510 520 530 540 550
1CDKA ( 256 ) ---------------------r----------------------------
1A6O ( 262 ) rieldpqlealVgrhsrkpWlk----------------------------
1HCK ( 250 ) ---------------------k----------------------------
1BLXA ( 264 ) ---------------------k----------------------------
1JNK ( 312 ) ---------------------L----------------------------
3ERK ( 275 ) ---------------------r----------------------------
1BMKA ( 238 ) ---------------------lVgTPgaeLlkkIssesarnyIqslaqmp
1KOBA ( 268 ) ---------------------e----------------------------
1TKIA ( 238 ) ---------------------t----------------------------
1PHK ( 247 ) ---------------------q----------------------------
1A06 ( 236 ) ---------------------e----------------------------
560 570 580 590 600
1CDKA ( 257 ) ------F------------p----s-----hF-----------ssdLkdL
1A6O ( 284 ) ------f------------m----nadNqhLV-----------speAidF
1HCK ( 251 ) ------v------------V----p-----pL-----------dedGrsL
1BLXA ( 265 ) ------f------------V----t-----dI-----------delGkdL
1JNK ( 313 ) ------F------------p----d-----slFpadsehnklkAsqArdL
3ERK ( 276 ) ------l------------F----p-----nA-----------dskAldL
1BMKA ( 267 ) kmnFanv------------F----i-----ga-----------nplAvdL
1KOBA ( 269 ) ------f------------dedaFs-----sV-----------speAkdF
1TKIA ( 239 ) ------f--------deeaF----k-----ei-----------sieAmdF
1PHK ( 248 ) ------f----gspe----W----d-----dy-----------sdtVkdL
1A06 ( 237 ) ------fdspy--------W----d-----di-----------sdsAkdF
aaaaaa
610 620 630
1CDKA ( 269 ) LrnLLqvdltkRfGnlkdgvndIknHkWFattdwia
1A6O ( 301 ) LdkLLrydHqeRlt-----AleAmthpYFqqVra
1HCK ( 263 ) LsqMLhydpnkRis-----AkaAlahpFFqdvt
1BLXA ( 277 ) LlkCLtfnpakRis-----AysAlshpYFq
1JNK ( 336 ) LskMLvIdpakRis-----VddAlqHpYInvwydp
3ERK ( 288 ) LdkMLtfnphkRie-----veqALahpYLeqyydp
1BMKA ( 285 ) LekMLvldsdkRit-----AaqAlahaYFaqyhdpd
1KOBA ( 285 ) IknLLqkeprkRlt-----VhdAlehpWLkgdh
1TKIA ( 255 ) VdrLLvkerksRmt-----AseAlqhpWLkqk
1PHK ( 264 ) VsrFLvvqpqkRyt-----AeeAlaHpFFqq
1A06 ( 253 ) IrhLMekdpekRft-----CeqAlqhpwIagd
aaaa aaaaa
Key to read JOY format
solvent inaccessible UPPER CASE X
solvent accesible lower case x
alpha helix red x
beta strand blue x
3 - 10 helix maroon x
hydrogen bond to main chain amide bold x
hydrogen bond to mainchain carbonyl underline x
disulphide bond cedilla ç
positive phi italic x
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